Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Gm44430-201ENSMUST00000203376 995 ntBASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Gm45328-201ENSMUST00000210942 917 ntBASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ndc80Q9D0F1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.22■□□□□ 0.19
Ndc80Q9D0F1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Ndc80Q9D0F1 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Ndc80Q9D0F1 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Gm7977-201ENSMUST00000193787 748 ntBASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ndc80Q9D0F1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms