Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm45605-201ENSMUST00000210265 4269 ntBASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Gm7889-201ENSMUST00000185591 958 ntBASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssr1Q9CY50 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Ssr1Q9CY50 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Gm18959-201ENSMUST00000208954 655 ntBASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ssr1Q9CY50 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm26039-201ENSMUST00000158152 144 ntBASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm43799-201ENSMUST00000201845 579 ntBASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Ssr1Q9CY50 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Ssr1Q9CY50 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.26■□□□□ 0.35
Ssr1Q9CY50 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms