Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Trmt13-210ENSMUST00000198454 880 ntBASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chd1lQ9CXF7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Gm15378-201ENSMUST00000121894 207 ntBASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chd1lQ9CXF7 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Gm5643-201ENSMUST00000117081 966 ntBASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Gm18115-201ENSMUST00000221209 621 ntBASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chd1lQ9CXF7 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Chd1lQ9CXF7 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm37728-201ENSMUST00000195025 2292 ntBASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Gm18421-201ENSMUST00000204122 625 ntBASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chd1lQ9CXF7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Chd1lQ9CXF7 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Chd1lQ9CXF7 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms