Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Gm29518-201ENSMUST00000190858 372 ntBASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.62■□□□□ 0.25
Rnf135Q9CWS1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf135Q9CWS1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Gm17807-201ENSMUST00000186869 298 ntBASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Gm37722-201ENSMUST00000193757 208 ntBASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf135Q9CWS1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf135Q9CWS1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
Rnf135Q9CWS1 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Gm17808-201ENSMUST00000200859 894 ntBASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Rnf135Q9CWS1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms