Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Pfdn1Q9CWM4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pfdn1Q9CWM4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Gm13146-201ENSMUST00000118508 780 ntBASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Pfdn1Q9CWM4 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Gm13401-201ENSMUST00000117074 291 ntBASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Mir7075-201ENSMUST00000184187 82 ntBASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pfdn1Q9CWM4 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pfdn1Q9CWM4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms