Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Gm9172-201ENSMUST00000212092 954 ntBASIC15.03■□□□□ -0
Otud1Q9CUB6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.03■□□□□ -0
Otud1Q9CUB6 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Otud1Q9CUB6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Otud1Q9CUB6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Otud1Q9CUB6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.02■□□□□ -0
Otud1Q9CUB6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Otud1Q9CUB6 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.02■□□□□ -0
Otud1Q9CUB6 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC15.02■□□□□ -0
Otud1Q9CUB6 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Otud1Q9CUB6 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Otud1Q9CUB6 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Gm4535-201ENSMUST00000182274 558 ntBASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Gm10355-201ENSMUST00000097146 517 ntBASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Otud1Q9CUB6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Mir5131-201ENSMUST00000175426 93 ntBASIC15□□□□□ -0.01
Otud1Q9CUB6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Otud1Q9CUB6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Otud1Q9CUB6 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Otud1Q9CUB6 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Otud1Q9CUB6 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Otud1Q9CUB6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Otud1Q9CUB6 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Otud1Q9CUB6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms