Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Gm9519-201ENSMUST00000206108 1337 ntBASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Gm12895-201ENSMUST00000122214 226 ntBASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retreg3Q9CQV4 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16■□□□□ 0.15
Retreg3Q9CQV4 Mir8098-201ENSMUST00000184011 137 ntBASIC16■□□□□ 0.15
Retreg3Q9CQV4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Retreg3Q9CQV4 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16■□□□□ 0.15
Retreg3Q9CQV4 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Gm34391-201ENSMUST00000203706 907 ntBASIC16■□□□□ 0.15
Retreg3Q9CQV4 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retreg3Q9CQV4 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Retreg3Q9CQV4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm25406-201ENSMUST00000157599 105 ntBASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.98■□□□□ 0.15
Retreg3Q9CQV4 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms