Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Gm15820-201ENSMUST00000201566 728 ntBASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Chchd1Q9CQA6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Chchd1Q9CQA6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Chchd1Q9CQA6 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Chchd1Q9CQA6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Chchd1Q9CQA6 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms