Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Rpa3Q9CQ71 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Mir6404-201ENSMUST00000183699 94 ntBASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Gm17807-201ENSMUST00000186869 298 ntBASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rpa3Q9CQ71 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rpa3Q9CQ71 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rpa3Q9CQ71 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rpa3Q9CQ71 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Gm44454-201ENSMUST00000198541 138 ntBASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rpa3Q9CQ71 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms