Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trim16Q99PP9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gm25016-201ENSMUST00000158399 131 ntBASIC15.61■□□□□ 0.09
Trim16Q99PP9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gm29707-201ENSMUST00000196325 491 ntBASIC15.61■□□□□ 0.09
Trim16Q99PP9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.61■□□□□ 0.09
Trim16Q99PP9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trim16Q99PP9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trim16Q99PP9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Mir770-201ENSMUST00000103252 94 ntBASIC15.59■□□□□ 0.09
Trim16Q99PP9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.59■□□□□ 0.09
Trim16Q99PP9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trim16Q99PP9 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Trim16Q99PP9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms