Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm13216-201ENSMUST00000117145 591 ntBASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Gm45612-201ENSMUST00000211320 160 ntBASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Col25a1Q99MQ5 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col25a1Q99MQ5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.46■□□□□ 0.22
Col25a1Q99MQ5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col25a1Q99MQ5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Gm8825-201ENSMUST00000182565 998 ntBASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 AC159106.1-201ENSMUST00000224421 690 ntBASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Nrn1-204ENSMUST00000224323 1779 ntBASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col25a1Q99MQ5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Gm11745-201ENSMUST00000121669 448 ntBASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col25a1Q99MQ5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Gm43630-201ENSMUST00000201550 776 ntBASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col25a1Q99MQ5 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Gm44719-201ENSMUST00000206404 149 ntBASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms