Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Gm18421-201ENSMUST00000204122 625 ntBASIC15.48■□□□□ 0.07
Rnf111Q99ML9 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rnf111Q99ML9 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Rnf111Q99ML9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Gm11355-201ENSMUST00000121120 306 ntBASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Gm37722-201ENSMUST00000193757 208 ntBASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rnf111Q99ML9 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf111Q99ML9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf111Q99ML9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf111Q99ML9 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rnf111Q99ML9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rnf111Q99ML9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms