Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.9□□□□□ -0.02
Nkx6-1Q99MA9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Gm20949-201ENSMUST00000206478 952 ntBASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx6-1Q99MA9 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx6-1Q99MA9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Gm8969-201ENSMUST00000199694 526 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Gm7787-201ENSMUST00000216858 688 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.87□□□□□ -0.03
Nkx6-1Q99MA9 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms