Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Scrt1Q99M85 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scrt1Q99M85 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scrt1Q99M85 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Scrt1Q99M85 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Gm14140-201ENSMUST00000119999 995 ntBASIC13.95□□□□□ -0.18
Scrt1Q99M85 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.95□□□□□ -0.18
Scrt1Q99M85 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Scrt1Q99M85 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.94□□□□□ -0.18
Scrt1Q99M85 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Gm45203-201ENSMUST00000206384 1831 ntBASIC13.94□□□□□ -0.18
Scrt1Q99M85 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Scrt1Q99M85 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.94□□□□□ -0.18
Scrt1Q99M85 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.93□□□□□ -0.18
Scrt1Q99M85 Gm9727-201ENSMUST00000161387 555 ntBASIC13.93□□□□□ -0.18
Scrt1Q99M85 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.93□□□□□ -0.18
Scrt1Q99M85 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Scrt1Q99M85 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gm25911-201ENSMUST00000157621 56 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms