Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Gm44882-201ENSMUST00000205702 802 ntBASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb3Q91XZ7 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 BC037039-201ENSMUST00000192003 2205 ntBASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhb3Q91XZ7 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhb3Q91XZ7 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhb3Q91XZ7 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Wnt10b-204ENSMUST00000226655 1807 ntBASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhb3Q91XZ7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Gm38027-201ENSMUST00000192315 235 ntBASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb3Q91XZ7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms