Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.87■□□□□ 0.61
StrcQ8VIM6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
StrcQ8VIM6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Gm10499-201ENSMUST00000174094 934 ntBASIC18.86■□□□□ 0.61
StrcQ8VIM6 Gm6473-201ENSMUST00000188572 1210 ntBASIC18.86■□□□□ 0.61
StrcQ8VIM6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Gm2272-201ENSMUST00000194903 582 ntBASIC18.86■□□□□ 0.61
StrcQ8VIM6 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
StrcQ8VIM6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Gm7488-201ENSMUST00000117148 684 ntBASIC18.85■□□□□ 0.61
StrcQ8VIM6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
StrcQ8VIM6 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
StrcQ8VIM6 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Mir8102-201ENSMUST00000184148 139 ntBASIC18.84■□□□□ 0.61
StrcQ8VIM6 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.84■□□□□ 0.61
StrcQ8VIM6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
StrcQ8VIM6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.83■□□□□ 0.61
StrcQ8VIM6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
StrcQ8VIM6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
StrcQ8VIM6 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Gm13453-201ENSMUST00000118708 357 ntBASIC18.82■□□□□ 0.6
StrcQ8VIM6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Gm44855-201ENSMUST00000205725 362 ntBASIC18.82■□□□□ 0.6
StrcQ8VIM6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC18.82■□□□□ 0.6
StrcQ8VIM6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.82■□□□□ 0.6
StrcQ8VIM6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
StrcQ8VIM6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
StrcQ8VIM6 Gm12490-201ENSMUST00000120255 560 ntBASIC18.81■□□□□ 0.6
StrcQ8VIM6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
StrcQ8VIM6 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.81■□□□□ 0.6
StrcQ8VIM6 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms