Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nup35Q8R4R6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nup35Q8R4R6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Odf3b-204ENSMUST00000227834 930 ntBASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nup35Q8R4R6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Nup35Q8R4R6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 BC037039-201ENSMUST00000192003 2205 ntBASIC13□□□□□ -0.33
Nup35Q8R4R6 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm15442-201ENSMUST00000117905 1527 ntBASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm29707-201ENSMUST00000196325 491 ntBASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13□□□□□ -0.33
Nup35Q8R4R6 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Nup35Q8R4R6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms