Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
Ccdc58Q8R3Q6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Gm13181-201ENSMUST00000120117 1069 ntBASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc58Q8R3Q6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 AC154855.1-201ENSMUST00000227353 1458 ntBASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc58Q8R3Q6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc58Q8R3Q6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc58Q8R3Q6 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.29□□□□□ -0.12
Ccdc58Q8R3Q6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc58Q8R3Q6 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms