Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Gm22240-201ENSMUST00000175225 82 ntBASIC16.15■□□□□ 0.18
Slf1Q8R3P9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Slf1Q8R3P9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Slf1Q8R3P9 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Gm17661-201ENSMUST00000170317 270 ntBASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.13■□□□□ 0.17
Slf1Q8R3P9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Slf1Q8R3P9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Gm10812-201ENSMUST00000099864 546 ntBASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Slf1Q8R3P9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Gm38027-201ENSMUST00000192315 235 ntBASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Slf1Q8R3P9 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms