Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubqln1Q8R317 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.12■□□□□ 0.01
Ubqln1Q8R317 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ubqln1Q8R317 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.12■□□□□ 0.01
Ubqln1Q8R317 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ubqln1Q8R317 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Ubqln1Q8R317 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Gm13312-201ENSMUST00000119631 718 ntBASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ubqln1Q8R317 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubqln1Q8R317 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubqln1Q8R317 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubqln1Q8R317 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Ubqln1Q8R317 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Olfr129-201ENSMUST00000122318 993 ntBASIC15.08■□□□□ 0
Ubqln1Q8R317 Gm7284-201ENSMUST00000131667 944 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms