Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Zcchc9Q8R1J3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Zcchc9Q8R1J3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Zcchc9Q8R1J3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Zcchc9Q8R1J3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Gm7230-201ENSMUST00000173026 815 ntBASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Gm11620-201ENSMUST00000118770 1845 ntBASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Zcchc9Q8R1J3 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Gm11779-201ENSMUST00000118541 368 ntBASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Gm5264-201ENSMUST00000190584 848 ntBASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Zcchc9Q8R1J3 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms