Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Gm10355-201ENSMUST00000097146 517 ntBASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.06■□□□□ 0.32
Rpp40Q8R1F9 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Mzt1-203ENSMUST00000227948 952 ntBASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rpp40Q8R1F9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm7862-201ENSMUST00000121461 292 ntBASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rpp40Q8R1F9 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rpp40Q8R1F9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Gm25990-201ENSMUST00000102440 86 ntBASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rpp40Q8R1F9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Rpp40Q8R1F9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms