Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atf7Q8R0S1 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Gm7284-201ENSMUST00000131667 944 ntBASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Gm6257-201ENSMUST00000163864 910 ntBASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf7Q8R0S1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf7Q8R0S1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 App-207ENSMUST00000227737 2827 ntBASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Gm25406-201ENSMUST00000157599 105 ntBASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Atf7Q8R0S1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Atf7Q8R0S1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Atf7Q8R0S1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms