Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Gm9172-201ENSMUST00000212092 954 ntBASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Gm44872-201ENSMUST00000207864 420 ntBASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Alms1Q8K4E0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Alms1Q8K4E0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Alms1Q8K4E0 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Alms1Q8K4E0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Alms1Q8K4E0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.5■□□□□ 0.07
Alms1Q8K4E0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Gm5745-201ENSMUST00000183748 313 ntBASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Gm44492-201ENSMUST00000197012 141 ntBASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Alms1Q8K4E0 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms