Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Shtn1Q8K2Q9 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 AC155252.2-201ENSMUST00000226946 680 ntBASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Grk6-207ENSMUST00000225925 2769 ntBASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Shtn1Q8K2Q9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Gm11025-201ENSMUST00000140773 466 ntBASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.71■□□□□ 0.59
Shtn1Q8K2Q9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.71■□□□□ 0.58
Shtn1Q8K2Q9 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 AA543401-201ENSMUST00000164248 1269 ntBASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gm8969-201ENSMUST00000199694 526 ntBASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Shtn1Q8K2Q9 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC18.69■□□□□ 0.58
Shtn1Q8K2Q9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms