Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cchcr1Q8K2I2 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.87■□□□□ 0.61
Cchcr1Q8K2I2 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Gm9987-201ENSMUST00000069768 567 ntBASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.86■□□□□ 0.61
Cchcr1Q8K2I2 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cchcr1Q8K2I2 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Gm6623-201ENSMUST00000173570 544 ntBASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Mir6404-201ENSMUST00000183699 94 ntBASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Gm5587-201ENSMUST00000206270 674 ntBASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.84■□□□□ 0.61
Cchcr1Q8K2I2 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cchcr1Q8K2I2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.83■□□□□ 0.6
Cchcr1Q8K2I2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms