Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Gm15590-201ENSMUST00000078419 552 ntBASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rdh1Q8CGV4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rdh1Q8CGV4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rdh1Q8CGV4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Gm8344-201ENSMUST00000119813 856 ntBASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Gm27525-201ENSMUST00000184465 107 ntBASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rdh1Q8CGV4 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms