Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Rp1l1Q8CGM2 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Gm7730-201ENSMUST00000212486 454 ntBASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Rp1l1Q8CGM2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Gm24158-201ENSMUST00000175263 71 ntBASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Mir7684-201ENSMUST00000183858 60 ntBASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Rp1l1Q8CGM2 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Gm6973-201ENSMUST00000117080 721 ntBASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Rp1l1Q8CGM2 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Gm27306-201ENSMUST00000183970 107 ntBASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Rp1l1Q8CGM2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms