Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 AC117588.1-201ENSMUST00000228510 999 ntBASIC19.59■□□□□ 0.73
Smc4Q8CG47 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smc4Q8CG47 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Smc4Q8CG47 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Smc4Q8CG47 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC19.58■□□□□ 0.72
Smc4Q8CG47 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.57■□□□□ 0.72
Smc4Q8CG47 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC19.57■□□□□ 0.72
Smc4Q8CG47 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 AW822252-206ENSMUST00000208904 237 ntBASIC19.57■□□□□ 0.72
Smc4Q8CG47 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Smc4Q8CG47 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Smc4Q8CG47 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 AC154527.4-201ENSMUST00000224364 1667 ntBASIC19.56■□□□□ 0.72
Smc4Q8CG47 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC19.56■□□□□ 0.72
Smc4Q8CG47 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc4Q8CG47 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.55■□□□□ 0.72
Smc4Q8CG47 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc4Q8CG47 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.54■□□□□ 0.72
Smc4Q8CG47 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC19.54■□□□□ 0.72
Smc4Q8CG47 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms