Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Gm27389-201ENSMUST00000183622 195 ntBASIC19.71■□□□□ 0.75
Smc5Q8CG46 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.71■□□□□ 0.75
Smc5Q8CG46 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Smc5Q8CG46 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.7■□□□□ 0.74
Smc5Q8CG46 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Smc5Q8CG46 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Smc5Q8CG46 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gm11355-201ENSMUST00000121120 306 ntBASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.68■□□□□ 0.74
Smc5Q8CG46 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms