Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vcpip1Q8CDG3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vcpip1Q8CDG3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vcpip1Q8CDG3 Asic1-205ENSMUST00000228185 1818 ntBASIC17.14■□□□□ 0.34
Vcpip1Q8CDG3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vcpip1Q8CDG3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Vcpip1Q8CDG3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Ank2-226ENSMUST00000189368 339 ntBASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vcpip1Q8CDG3 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vcpip1Q8CDG3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms