Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Gm6089-201ENSMUST00000197666 938 ntBASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shisa4Q8CA71 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shisa4Q8CA71 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shisa4Q8CA71 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm5682-201ENSMUST00000173402 505 ntBASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm2651-201ENSMUST00000203560 838 ntBASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shisa4Q8CA71 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shisa4Q8CA71 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms