Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
Uba3Q8C878 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.78■□□□□ 0.28
Uba3Q8C878 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC16.78■□□□□ 0.28
Uba3Q8C878 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.78■□□□□ 0.28
Uba3Q8C878 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Uba3Q8C878 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Uba3Q8C878 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.77■□□□□ 0.28
Uba3Q8C878 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Uba3Q8C878 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.77■□□□□ 0.28
Uba3Q8C878 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Uba3Q8C878 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.77■□□□□ 0.28
Uba3Q8C878 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Uba3Q8C878 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.77■□□□□ 0.27
Uba3Q8C878 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Uba3Q8C878 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Uba3Q8C878 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Uba3Q8C878 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.77■□□□□ 0.27
Uba3Q8C878 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Gm12644-201ENSMUST00000119935 606 ntBASIC16.76■□□□□ 0.27
Uba3Q8C878 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Uba3Q8C878 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.76■□□□□ 0.27
Uba3Q8C878 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Gm25406-201ENSMUST00000157599 105 ntBASIC16.75■□□□□ 0.27
Uba3Q8C878 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Gm17971-201ENSMUST00000190239 806 ntBASIC16.75■□□□□ 0.27
Uba3Q8C878 Gm7506-201ENSMUST00000207758 815 ntBASIC16.75■□□□□ 0.27
Uba3Q8C878 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.75■□□□□ 0.27
Uba3Q8C878 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Uba3Q8C878 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Uba3Q8C878 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms