Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm27306-201ENSMUST00000183970 107 ntBASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm13823-201ENSMUST00000119930 345 ntBASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm22175-201ENSMUST00000175007 78 ntBASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cfap54Q8C6S9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm14127-201ENSMUST00000117906 678 ntBASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm27437-201ENSMUST00000183429 107 ntBASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm43125-201ENSMUST00000201724 730 ntBASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cfap54Q8C6S9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cfap54Q8C6S9 Gm5184-201ENSMUST00000220417 1702 ntBASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cfap54Q8C6S9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Cfap54Q8C6S9 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.14■□□□□ 0.01
Cfap54Q8C6S9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms