Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Usp20Q8C6M1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Usp20Q8C6M1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Gm13036-201ENSMUST00000117799 748 ntBASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Usp20Q8C6M1 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gm5837-201ENSMUST00000191844 1369 ntBASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Usp20Q8C6M1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Gm15467-201ENSMUST00000120582 445 ntBASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Usp20Q8C6M1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Mir6404-201ENSMUST00000183699 94 ntBASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.55■□□□□ 0.4
Usp20Q8C6M1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms