Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Col6a6Q8C6K9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gm8969-201ENSMUST00000199694 526 ntBASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Col6a6Q8C6K9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Mir7023-201ENSMUST00000185093 64 ntBASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Gm15358-201ENSMUST00000119249 520 ntBASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col6a6Q8C6K9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.3□□□□□ -0.12
Col6a6Q8C6K9 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms