Protein–RNA interactions for Protein: Q8C5U9

Ubqln3, Ubiquilin-3, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln3Q8C5U9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.03□□□□□ -0.16
Ubqln3Q8C5U9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ubqln3Q8C5U9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ubqln3Q8C5U9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Gm7284-201ENSMUST00000131667 944 ntBASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ubqln3Q8C5U9 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Gm27704-201ENSMUST00000185094 107 ntBASIC14□□□□□ -0.17
Ubqln3Q8C5U9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ubqln3Q8C5U9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubqln3Q8C5U9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ubqln3Q8C5U9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms