Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tsen54Q8C2A2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gm16042-201ENSMUST00000204813 1247 ntBASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Timm23-208ENSMUST00000226683 750 ntBASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Tsen54Q8C2A2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Mir5122-201ENSMUST00000175004 89 ntBASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tsen54Q8C2A2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms