Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SprnQ8BWU1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.09□□□□□ -0.15
SprnQ8BWU1 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SprnQ8BWU1 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SprnQ8BWU1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SprnQ8BWU1 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
SprnQ8BWU1 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.08□□□□□ -0.16
SprnQ8BWU1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SprnQ8BWU1 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.07□□□□□ -0.16
SprnQ8BWU1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SprnQ8BWU1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SprnQ8BWU1 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms