Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Gm37153-201ENSMUST00000193637 231 ntBASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scfd1Q8BRF7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scfd1Q8BRF7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Haglr-201ENSMUST00000100000 2085 ntBASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Gm11594-201ENSMUST00000122313 162 ntBASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scfd1Q8BRF7 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scfd1Q8BRF7 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scfd1Q8BRF7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Gm45167-201ENSMUST00000208007 322 ntBASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scfd1Q8BRF7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scfd1Q8BRF7 Gm14494-201ENSMUST00000118786 435 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms