Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Cpsf4Q8BQZ5 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.48■□□□□ 0.07
Cpsf4Q8BQZ5 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Cpsf4Q8BQZ5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Olfr129-201ENSMUST00000122318 993 ntBASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Cpsf4Q8BQZ5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms