Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco3Q8BQM7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Gm37292-201ENSMUST00000192062 758 ntBASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco3Q8BQM7 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smco3Q8BQM7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smco3Q8BQM7 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms