Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Sfr1Q8BP27 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Sfr1Q8BP27 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Sfr1Q8BP27 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sfr1Q8BP27 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sfr1Q8BP27 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms