Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm13186-201ENSMUST00000118031 316 ntBASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm27389-201ENSMUST00000183622 195 ntBASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm29994-201ENSMUST00000195495 1193 ntBASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.12■□□□□ 0.01
Ckap4Q8BMK4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Gm18115-201ENSMUST00000221209 621 ntBASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ckap4Q8BMK4 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Gm18101-201ENSMUST00000215769 548 ntBASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Ckap4Q8BMK4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Ckap4Q8BMK4 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms