Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Gm27618-201ENSMUST00000183671 60 ntBASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Gm44719-201ENSMUST00000206404 149 ntBASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Smg1Q8BKX6 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Smg1Q8BKX6 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Smg1Q8BKX6 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gm10253-201ENSMUST00000194270 940 ntBASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smg1Q8BKX6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm18062-201ENSMUST00000208020 547 ntBASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Gm18055-201ENSMUST00000208254 547 ntBASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smg1Q8BKX6 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm43433-201ENSMUST00000196573 481 ntBASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm14928-201ENSMUST00000120198 477 ntBASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.37□□□□□ -0.27
Smg1Q8BKX6 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.37□□□□□ -0.27
Smg1Q8BKX6 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms