Protein–RNA interactions for Protein: Q8BK35

Nop53, Ribosome biogenesis protein NOP53, mousemouse

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop53Q8BK35 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Nop53Q8BK35 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.1■□□□□ 0.33
Nop53Q8BK35 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Prob1-201ENSMUST00000097619 3021 ntBASIC17.1■□□□□ 0.33
Nop53Q8BK35 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC17.1■□□□□ 0.33
Nop53Q8BK35 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Gm26039-201ENSMUST00000158152 144 ntBASIC17.09■□□□□ 0.33
Nop53Q8BK35 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.09■□□□□ 0.33
Nop53Q8BK35 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.09■□□□□ 0.33
Nop53Q8BK35 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.09■□□□□ 0.33
Nop53Q8BK35 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Nop53Q8BK35 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop53Q8BK35 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Nop53Q8BK35 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.08■□□□□ 0.32
Nop53Q8BK35 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Mir1668-201ENSMUST00000184114 107 ntBASIC17.08■□□□□ 0.32
Nop53Q8BK35 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.08■□□□□ 0.32
Nop53Q8BK35 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.08■□□□□ 0.32
Nop53Q8BK35 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Nop53Q8BK35 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gm23634-201ENSMUST00000175071 91 ntBASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nop53Q8BK35 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms