Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chmp2bQ8BJF9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Gm13559-201ENSMUST00000120476 863 ntBASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chmp2bQ8BJF9 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.33■□□□□ 0.21
Chmp2bQ8BJF9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chmp2bQ8BJF9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Mir1668-201ENSMUST00000184114 107 ntBASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chmp2bQ8BJF9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chmp2bQ8BJF9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms