Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Slc5a7Q8BGY9 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm16425-201ENSMUST00000118143 3130 ntBASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Slc5a7Q8BGY9 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Slc5a7Q8BGY9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 AC154855.1-201ENSMUST00000227353 1458 ntBASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Gm27405-201ENSMUST00000184201 112 ntBASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Gm36967-201ENSMUST00000193814 266 ntBASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Slc5a7Q8BGY9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc5a7Q8BGY9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Slc5a7Q8BGY9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms