Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Gm44492-201ENSMUST00000197012 141 ntBASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Npas4Q8BGD7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 AC124549.3-201ENSMUST00000225541 367 ntBASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Npas4Q8BGD7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Gm14701-201ENSMUST00000117156 348 ntBASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Mir7036b-201ENSMUST00000184791 63 ntBASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Npas4Q8BGD7 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Gm13597-201ENSMUST00000121239 375 ntBASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Gm17968-201ENSMUST00000194902 784 ntBASIC16.71■□□□□ 0.27
Npas4Q8BGD7 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Npas4Q8BGD7 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.71■□□□□ 0.26
Npas4Q8BGD7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Gm8396-201ENSMUST00000057361 823 ntBASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Npas4Q8BGD7 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms