Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Gm10653-202ENSMUST00000139570 835 ntBASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Gm7370-201ENSMUST00000219471 767 ntBASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Upk3bQ80YF6 App-207ENSMUST00000227737 2827 ntBASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 AC135963.1-201ENSMUST00000211640 717 ntBASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Upk3bQ80YF6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Gm16061-201ENSMUST00000122167 857 ntBASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Sybu-209ENSMUST00000228639 4113 ntBASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Upk3bQ80YF6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Spsb2-203ENSMUST00000112473 1322 ntBASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Upk3bQ80YF6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms